Transcript: ENSGALT00010009597.1 COL12A1-203

Description

collagen type XII alpha 1 chain [Source:NCBI gene (formerly Entrezgene);Acc:395875]

Location

About this transcript

This transcript has 66 exons, is annotated with 160 domains and features, is associated with 2408 variant alleles and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010009597.1	COL12A1-203	10582	3122aa	ENSGALP00010005636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1RPW4	-
ENSGALT00010009589.1	COL12A1-202	10456	3065aa	ENSGALP00010005635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5P8I8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010009577.1	COL12A1-204	10136	3059aa	ENSGALP00010005629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010009585.1	COL12A1-201	9500	3065aa	ENSGALP00010005631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1NX22	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary

Statistics

Exons: 66, Coding exons: 65, Transcript length: 10,582 bps, Translation length: 3,122 residues

Version

ENSGALT00010009597.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.