Transcript: ENSGALT00010003980.1 SATB1-202

Description

SATB homeobox 1 [Source:NCBI gene (formerly Entrezgene);Acc:420647]

Location

About this transcript

This transcript has 13 exons, is annotated with 30 domains and features, is associated with 1307 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010003980.1	SATB1-202	4235	786aa	ENSGALP00010002279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PV61	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010003979.1	SATB1-201	4115	754aa	ENSGALP00010002278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BRH4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010003978.1	SATB1-203	4046	738aa	ENSGALP00010002277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 4,235 bps, Translation length: 786 residues

Version

ENSGALT00010003980.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.