Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STXBP1 ENSGALG00010028893

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Description

syntaxin binding protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:404293]

Gene Synonyms

N-Sec1, Unc18-1, unc-18-1, unc-18A

Location

Primary_assembly 17: 3,111,770-3,126,617 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028498.1

About this gene

This gene has 5 transcripts (splice variants), 287 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010069900.1	STXBP1-202	3542	592aa	ENSGALP00010043026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010069901.1	STXBP1-203	3305	594aa	ENSGALP00010043027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PK28	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010069899.1	STXBP1-201	3127	603aa	ENSGALP00010043025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PHU2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010069898.1	STXBP1-205	3082	592aa	ENSGALP00010043024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010069902.1	STXBP1-204	3005	494aa	ENSGALP00010043028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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