Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP12A ENSGALG00010025507

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Description

ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene (formerly Entrezgene);Acc:419743]

Location

Primary_assembly 24: 2,903,560-2,921,221 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028505.1

About this gene

This gene has 2 transcripts (splice variants), 169 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010062269.1	ATP12A-202	3876	1033aa	ENSGALP00010038491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1NZB7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010062267.1	ATP12A-201	3591	1031aa	ENSGALP00010038490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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