Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL1A1 ENSGALG00010025092

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Description

collagen type I alpha 1 chain [Source:NCBI gene (formerly Entrezgene);Acc:395532]

Location

Primary_assembly 27: 2,738,241-2,755,487 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028508.1

About this gene

This gene has 8 transcripts (splice variants), 252 orthologues and 45 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010061359.1	COL1A1-201	4708	1320aa	ENSGALP00010037932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010061420.1	COL1A1-202	4602	1453aa	ENSGALP00010037962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PYU1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010061468.1	COL1A1-203	4449	1402aa	ENSGALP00010037976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010061538.1	COL1A1-204	4440	1399aa	ENSGALP00010038016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010061556.1	COL1A1-205	4404	1387aa	ENSGALP00010038026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010061567.1	COL1A1-206	4368	1375aa	ENSGALP00010038032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010061580.1	COL1A1-207	4350	1369aa	ENSGALP00010038039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010061586.1	COL1A1-208	4269	1342aa	ENSGALP00010038041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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