Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MAP1LC3A ENSGALG00010024665

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Description

microtubule associated protein 1 light chain 3 alpha [Source:HGNC Symbol;Acc:HGNC:6838]

Location

Primary_assembly 20: 1,728,032-1,741,190 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028501.1

About this gene

This gene has 5 transcripts (splice variants), 193 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010060220.1	MAP1LC3A-203	1667	172aa	ENSGALP00010036980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010060219.1	MAP1LC3A-202	1661	120aa	ENSGALP00010036979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010060214.1	MAP1LC3A-201	1641	126aa	ENSGALP00010036974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010060222.1	MAP1LC3A-204	1550	162aa	ENSGALP00010036982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010060223.1	MAP1LC3A-205	1517	121aa	ENSGALP00010036983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PFR7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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