Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PIKFYVE ENSGALG00010022245

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Description

phosphoinositide kinase, FYVE-type zinc finger containing [Source:HGNC Symbol;Acc:HGNC:23785]

Location

Primary_assembly 7: 13,425,566-13,487,386 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028488.1

About this gene

This gene has 6 transcripts (splice variants), 203 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010054154.1	PIKFYVE-203	7472	2132aa	ENSGALP00010032685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010054178.1	PIKFYVE-205	7569	2122aa	ENSGALP00010032706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010054167.1	PIKFYVE-201	7557	2118aa	ENSGALP00010032698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1NNU6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010054190.1	PIKFYVE-202	7270	2062aa	ENSGALP00010032714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PIM2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010054198.1	PIKFYVE-206	7224	2007aa	ENSGALP00010032720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010054129.1	PIKFYVE-204	1622	170aa	ENSGALP00010032660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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