Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS54 ENSGALG00010018923

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Description

VPS54 subunit of GARP complex [Source:HGNC Symbol;Acc:HGNC:18652]

Location

Primary_assembly 3: 9,762,366-9,804,691 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028484.1

About this gene

This gene has 2 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010045792.1	VPS54-201	4355	974aa	ENSGALP00010027298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BRC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010045788.1	VPS54-202	3352	919aa	ENSGALP00010027294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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