Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TBL1XR1 ENSGALG00010018396

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Description

transducin beta like 1 X-linked receptor 1 [Source:NCBI gene (formerly Entrezgene);Acc:426284]

Location

Primary_assembly 9: 17,605,420-17,729,994 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028490.1

About this gene

This gene has 6 transcripts (splice variants), 292 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010044602.1	TBL1XR1-204	4995	512aa	ENSGALP00010026552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010044592.1	TBL1XR1-205	4723	473aa	ENSGALP00010026545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2UBU6	-
ENSGALT00010044611.1	TBL1XR1-202	3989	498aa	ENSGALP00010026559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010044566.1	TBL1XR1-203	3128	552aa	ENSGALP00010026528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010044481.1	TBL1XR1-206	3121	457aa	ENSGALP00010026475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010044620.1	TBL1XR1-201	2820	513aa	ENSGALP00010026566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NXL1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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