TNF receptor superfamily member 1B [Source:NCBI gene (formerly Entrezgene);Acc:395083]
TNFR-II
Primary_assembly 21: 5,445,530-5,458,751 reverse strand.
bGalGal1.mat.broiler.GRCg7b:CM028502.1
This gene has 6 transcripts (splice variants), 10 orthologues and 17 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSGALT00010042264.1 | TNFRSF1B-201 | 3036 | 488aa | ENSGALP00010024768.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010042256.1 | TNFRSF1B-202 | 3003 | 452aa | ENSGALP00010024764.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010042257.1 | TNFRSF1B-203 | 2979 | 444aa | ENSGALP00010024765.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010042267.1 | TNFRSF1B-205 | 2903 | 462aa | ENSGALP00010024770.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1D5PTU3 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSGALT00010042266.1 | TNFRSF1B-204 | 2894 | 471aa | ENSGALP00010024769.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010042260.1 | TNFRSF1B-206 | 2873 | 457aa | ENSGALP00010024767.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
