Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NIPAL3 ENSGALG00010015855

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Description

NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]

Location

Primary_assembly 23: 6,123,622-6,135,424 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028504.1

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010038191.1	NIPAL3-203	2404	408aa	ENSGALP00010022041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BR96	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010038194.1	NIPAL3-201	4875	407aa	ENSGALP00010022044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010038192.1	NIPAL3-204	2344	388aa	ENSGALP00010022042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010038193.1	NIPAL3-202	2285	380aa	ENSGALP00010022043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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