Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDE4D ENSGALG00010015196

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Description

phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]

Location

Primary_assembly Z: 18,793,419-18,962,417 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028522.1

About this gene

This gene has 4 transcripts (splice variants), 244 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010036633.1	PDE4D-204	2610	684aa	ENSGALP00010021366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PP20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010036625.1	PDE4D-201	4833	582aa	ENSGALP00010021358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2UN62	-
ENSGALT00010036631.1	PDE4D-202	2809	674aa	ENSGALP00010021364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010036620.1	PDE4D-203	2630	515aa	ENSGALP00010021353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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