Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL3A1 ENSGALG00010013170

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Description

collagen type III alpha 1 chain [Source:NCBI gene (formerly Entrezgene);Acc:396340]

Gene Synonyms

collagen

Location

Primary_assembly 7: 670,613-721,510 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028488.1

About this gene

This gene has 10 transcripts (splice variants), 4 orthologues and 45 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010031600.1	COL3A1-210	5512	1460aa	ENSGALP00010018468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PE57	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010031614.1	COL3A1-209	5464	1444aa	ENSGALP00010018481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010031633.1	COL3A1-208	5458	1442aa	ENSGALP00010018498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010031648.1	COL3A1-207	5437	1435aa	ENSGALP00010018512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010031654.1	COL3A1-206	5431	1433aa	ENSGALP00010018517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010031659.1	COL3A1-205	5350	1406aa	ENSGALP00010018521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010031664.1	COL3A1-204	5242	1370aa	ENSGALP00010018524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010031670.1	COL3A1-203	5161	1343aa	ENSGALP00010018529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010031676.1	COL3A1-202	5152	1340aa	ENSGALP00010018533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010031680.1	COL3A1-201	4780	1450aa	ENSGALP00010018534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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