Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: H2AFJ ENSGALG00010012248

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Description

H2A histone family, member J [Source:NCBI gene (formerly Entrezgene);Acc:417947]

Gene Synonyms

H2A-IX, H2AJ, HIST1H2A9

Location

Primary_assembly 1: 48,127,641-48,178,985 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028482.1

About this gene

This gene has 7 transcripts (splice variants), 261 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010029362.1	H2AFJ-202	4519	129aa	ENSGALP00010017052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P70082	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010029352.1	H2AFJ-203	3945	150aa	ENSGALP00010017048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010029356.1	H2AFJ-204	2937	150aa	ENSGALP00010017050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010029350.1	H2AFJ-205	1723	129aa	ENSGALP00010017046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P70082	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010029346.1	H2AFJ-206	1416	129aa	ENSGALP00010017043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P70082	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010029374.1	H2AFJ-207	970	129aa	ENSGALP00010017060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010029367.1	H2AFJ-201	652	150aa	ENSGALP00010017054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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