Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NR2C1 ENSGALG00010011653

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Description

nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene (formerly Entrezgene);Acc:373913]

Location

Primary_assembly 1: 45,369,355-45,420,216 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028482.1

About this gene

This gene has 6 transcripts (splice variants), 232 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010027886.1	NR2C1-202	8636	562aa	ENSGALP00010015997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q3AF95	-
ENSGALT00010027876.1	NR2C1-201	8343	535aa	ENSGALP00010015992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010027892.1	NR2C1-204	2609	622aa	ENSGALP00010016003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010027881.1	NR2C1-205	2561	609aa	ENSGALP00010015994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1NW94	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010027889.1	NR2C1-203	2540	633aa	ENSGALP00010016000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010027890.1	NR2C1-206	2465	639aa	ENSGALP00010016001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5P5I7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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