Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL1A2 ENSGALG00010003307

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Description

collagen type I alpha 2 chain [Source:NCBI gene (formerly Entrezgene);Acc:396243]

Gene Synonyms

COLA

Location

Primary_assembly 2: 23,456,131-23,515,037 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028483.1

About this gene

This gene has 6 transcripts (splice variants), 205 orthologues and 45 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010007787.1	COL1A2-201	5064	1363aa	ENSGALP00010004676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5H1ZRJ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010007782.1	COL1A2-204	4952	1312aa	ENSGALP00010004673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010007779.1	COL1A2-205	4891	1294aa	ENSGALP00010004671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010007763.1	COL1A2-206	4874	1295aa	ENSGALP00010004662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010007784.1	COL1A2-202	4828	1270aa	ENSGALP00010004674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010007786.1	COL1A2-203	4729	1237aa	ENSGALP00010004675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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