stromal interaction molecule 1 [Source:NCBI gene (formerly Entrezgene);Acc:419082]
Primary_assembly 1: 195,821,516-195,869,674 forward strand.
bGalGal1.mat.broiler.GRCg7b:CM028482.1
This gene has 7 transcripts (splice variants), 266 orthologues and 1 paralogue.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSGALT00010007566.1 | STIM1-203 | 3436 | 780aa | ENSGALP00010004505.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010007572.1 | STIM1-202 | 3424 | 781aa | ENSGALP00010004510.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010007570.1 | STIM1-206 | 3380 | 703aa | ENSGALP00010004509.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSGALT00010007567.1 | STIM1-204 | 3322 | 742aa | ENSGALP00010004506.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1D5NWP2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010007569.1 | STIM1-205 | 3214 | 706aa | ENSGALP00010004508.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010007575.1 | STIM1-201 | 3032 | 677aa | ENSGALP00010004511.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010007563.1 | STIM1-207 | 2764 | 654aa | ENSGALP00010004504.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
