Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRAPPC2 ENSGALG00010002418

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Description

trafficking protein particle complex 2 [Source:NCBI gene (formerly Entrezgene);Acc:418634]

Location

Primary_assembly 1: 123,088,782-123,094,639 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028482.1

About this gene

This gene has 3 transcripts (splice variants), 59 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010005561.1	TRAPPC2-201	2507	163aa	ENSGALP00010003400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010005562.1	TRAPPC2-202	1926	146aa	ENSGALP00010003401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010005564.1	TRAPPC2-203	1908	140aa	ENSGALP00010003403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5ZKP4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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