Gene: SMDT1 ENSG00000272835

Description

single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]

Gene Synonyms

C22ORF32, DDDD, DJ186O1.1, EMRE

Location

Scaffold HSCHR22_2_CTG1: 2,036-6,629 forward strand.

GRCh38:KB663609.1

View this gene on the primary assembly.

About this gene

This gene has 3 transcripts (splice variants) and 1 gene allele.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000607293.3	SMDT1-204	1567	107aa	ENSP00000475471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9H4I9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000625945.1	SMDT1-205	591	57aa	ENSP00000485728.1	Nonsense mediated decay	F8WDX6	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000628951.1	SMDT1-206	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: SMDT1 ENSG00000272835

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Gene: SMDT1 ENSG00000272835

Summary

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