Transcript: ENSDART00000190121.1 si:ch211-246m6.5-206

Description

si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]

Location

Chromosome 22: 14,178,813-14,272,699 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 37 domains and features, is associated with 1487 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000103750.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000190121.1	si:ch211-246m6.5-206	5233	1384aa	ENSDARP00000148759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RMM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000033332.8	si:ch211-246m6.5-202	1827	609aa	ENSDARP00000033391.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5X7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000168264.2	si:ch211-246m6.5-205	414	138aa	ENSDARP00000137007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILS2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000167088.2	si:ch211-246m6.5-204	316	106aa	ENSDARP00000140705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IY39	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000160605.2	si:ch211-246m6.5-203	372	85aa	ENSDARP00000137681.1	Nonsense mediated decay	A0A0R4IP64	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 5,233 bps, Translation length: 1,384 residues

Version

ENSDART00000190121.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000190121.1 si:ch211-246m6.5-206

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Transcript: ENSDART00000190121.1 si:ch211-246m6.5-206

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