Transcript: ENSDART00000188870.1 cdh17-203

Description

cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]

Gene Synonyms

cb903, fb65d02, wu:fb65d02

Location

About this transcript

This transcript has 18 exons, is annotated with 49 domains and features, is associated with 16 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042895.6	cdh17-201	3326	868aa	ENSDARP00000042894.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RD80	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188870.1	cdh17-203	3168	868aa	ENSDARP00000154473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RD80	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123187.3	cdh17-202	634	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,168 bps, Translation length: 868 residues

Version

ENSDART00000188870.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.