Transcript: ENSDART00000181455.1 sparc-207

Description

secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]

Gene Synonyms

hm:zeh0062, osn, osteonectin

Location

Chromosome 14: 25,937,948-25,949,713 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 11 variant alleles and maps to 165 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000019353.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039660.6	sparc-201	1724	291aa	ENSDARP00000039659.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PVV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181455.1	sparc-207	2567	291aa	ENSDARP00000156380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PVV8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135627.3	sparc-202	865	237aa	ENSDARP00000120684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJA9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141304.3	sparc-203	544	157aa	ENSDARP00000123354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCC2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146022.2	sparc-206	520	109aa	ENSDARP00000118359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJC0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142572.2	sparc-205	836	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000141916.2	sparc-204	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,567 bps, Translation length: 291 residues

Version

ENSDART00000181455.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000181455.1 sparc-207

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Transcript: ENSDART00000181455.1 sparc-207

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