Transcript: ENSDART00000179416.2 cltca-204

Description

clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]

Gene Synonyms

cb1033, cltc, wu:fc03e11, wu:fc49a11, wu:fd07f02

Location

Chromosome 10: 28,312,213-28,368,695 reverse strand.

About this transcript

This transcript has 32 exons, is annotated with 48 domains and features, is associated with 1048 variant alleles and maps to 314 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000043493.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000063849.5	cltca-201	6443	1680aa	ENSDARP00000063848.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R966	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000179416.2	cltca-204	5055	1684aa	ENSDARP00000144157.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YAZ4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000136176.2	cltca-202	747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000136864.2	cltca-203	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 32, Coding exons: 32, Transcript length: 5,055 bps, Translation length: 1,684 residues

Version

ENSDART00000179416.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000179416.2 cltca-204

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Transcript: ENSDART00000179416.2 cltca-204

Summary

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