Transcript: ENSDART00000175431.2 gbf1-203

Description

golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]

Gene Synonyms

sb:eu951, si:dkey-183c23.1

Location

Chromosome 13: 7,578,111-7,745,408 forward strand.

About this transcript

This transcript has 40 exons, is annotated with 33 domains and features, is associated with 2787 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000027016.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000175431.2	gbf1-203	5589	1862aa	ENSDARP00000143759.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9X1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000146592.3	gbf1-202	9522	1735aa	ENSDARP00000120536.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9B8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000046792.8	gbf1-201	5208	1735aa	ENSDARP00000046791.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9B8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 40, Coding exons: 40, Transcript length: 5,589 bps, Translation length: 1,862 residues

Version

ENSDART00000175431.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000175431.2 gbf1-203

Summary

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Transcript: ENSDART00000175431.2 gbf1-203

Summary

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