Transcript: ENSDART00000174287.2 zgc:123107-204

Description

zgc:123107 [Source:ZFIN;Acc:ZDB-GENE-051113-192]

Location

Chromosome 4: 76,377,227-76,383,262 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 17 domains and features, is associated with 549 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101675.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000174048.2	zgc:123107-203	1739	174aa	ENSDARP00000143187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000174287.2	zgc:123107-204	1985	256aa	ENSDARP00000143199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWN3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168456.2	zgc:123107-202	1342	256aa	ENSDARP00000131722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWN3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161866.2	zgc:123107-201	1077	256aa	ENSDARP00000140770.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IWN3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,985 bps, Translation length: 256 residues

Version

ENSDART00000174287.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000174287.2 zgc:123107-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000174287.2 zgc:123107-204

Summary

About Us

Get help

Our sister sites

Follow us