Transcript: ENSDART00000173681.2 si:dkeyp-75h12.7-201

Description

si:dkeyp-75h12.7 [Source:ZFIN;Acc:ZDB-GENE-160728-134]

Location

Chromosome 7: 24,573,721-24,582,259 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 132 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000105583.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173681.2	si:dkeyp-75h12.7-201	2451	443aa	ENSDARP00000142970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSZ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000173938.2	si:dkeyp-75h12.7-202	821	104aa	ENSDARP00000142735.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSC2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000189871.1	si:dkeyp-75h12.7-203	450	150aa	ENSDARP00000152191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QGP4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,451 bps, Translation length: 443 residues

Version

ENSDART00000173681.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000173681.2 si:dkeyp-75h12.7-201

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Transcript: ENSDART00000173681.2 si:dkeyp-75h12.7-201

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