Transcript: ENSDART00000173666.2 zgc:172079-201

Description

zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]

Location

About this transcript

This transcript has 8 exons, is associated with 228 variant alleles and maps to 224 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173666.2	zgc:172079-201	2311	196aa	ENSDARP00000142668.1	Nonsense mediated decay	A9UL52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 2,311 bps, Translation length: 196 residues

Version

ENSDART00000173666.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.