Transcript: ENSDART00000172543.2 trap1-202

Description

TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]

Gene Synonyms

fc85a11, wu:fc85a11

Location

About this transcript

This transcript has 19 exons, is annotated with 23 domains and features, is associated with 304 variant alleles and maps to 231 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172543.2	trap1-202	3039	719aa	ENSDARP00000139052.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9X9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000104875.5	trap1-201	2281	719aa	ENSDARP00000095645.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9X9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,039 bps, Translation length: 719 residues

Version

ENSDART00000172543.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.