Transcript: ENSDART00000168477.2 pycr1a-201

Description

pyrroline-5-carboxylate reductase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1675]

Gene Synonyms

pycr1, zgc:73112

Location

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 455 variant alleles and maps to 211 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168477.2	pycr1a-201	2551	320aa	ENSDARP00000133333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P971	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193840.1	pycr1a-203	2496	320aa	ENSDARP00000147896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P971	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170144.2	pycr1a-202	346	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,551 bps, Translation length: 320 residues

Version

ENSDART00000168477.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.