Transcript: ENSDART00000167705.2 stard13b-203

Description

StAR-related lipid transfer (START) domain containing 13b [Source:ZFIN;Acc:ZDB-GENE-050506-146]

Gene Synonyms

im:7147988

Location

Chromosome 15: 33,467,298-33,640,890 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 36 domains and features, is associated with 3946 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098954.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167705.2	stard13b-203	5770	1487aa	ENSDARP00000135603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F8B8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000187646.1	stard13b-204	3372	1123aa	ENSDARP00000156207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QSF6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000159882.2	stard13b-201	710	208aa	ENSDARP00000134729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIH6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000161151.2	stard13b-202	567	159aa	ENSDARP00000138606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IW40	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 5,770 bps, Translation length: 1,487 residues

Version

ENSDART00000167705.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000167705.2 stard13b-203

Summary

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Transcript: ENSDART00000167705.2 stard13b-203

Summary

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