Transcript: ENSDART00000166796.2 raraa-202

Description

retinoic acid receptor, alpha a [Source:NCBI gene;Acc:30680]

Gene Synonyms

NR1B1-A, RARalpha-A, etID309833.12, nr1b1a, rara, rara2a, zRAR, zRAR-alpha, zRAR-alpha-2.A, zgc:109797, zrara

Location

Chromosome 12: 11,007,286-11,156,717 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 43 domains and features, is associated with 3311 variant alleles and maps to 134 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056783.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079336.5	raraa-201	2492	444aa	ENSDARP00000073792.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90271	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000166796.2	raraa-202	1591	447aa	ENSDARP00000139532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	T2DKU4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000167090.2	raraa-203	638	83aa	ENSDARP00000132356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDZ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,591 bps, Translation length: 447 residues

Version

ENSDART00000166796.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000166796.2 raraa-202

Summary

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Transcript: ENSDART00000166796.2 raraa-202

Summary

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