Transcript: ENSDART00000164274.2 arid1b-202

Description

AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]

Gene Synonyms

fd07d11, si:dkey-60a16.3, wu:fd07d11

Location

Chromosome 20: 4,897,996-5,052,838 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 63 domains and features, is associated with 2872 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000092503.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000164274.2	arid1b-202	8905	2122aa	ENSDARP00000139784.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ISW4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000138818.4	arid1b-201	8791	2121aa	ENSDARP00000119606.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGW7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000181655.1	arid1b-203	8782	2081aa	ENSDARP00000146446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RJE4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 8,905 bps, Translation length: 2,122 residues

Version

ENSDART00000164274.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000164274.2 arid1b-202

Summary

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Transcript: ENSDART00000164274.2 arid1b-202

Summary

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