Transcript: ENSDART00000161610.2 tcf3b-201

Description

transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]

Gene Synonyms

tcf3a, zgc:113045

Location

About this transcript

This transcript has 21 exons, is annotated with 22 domains and features, is associated with 433 variant alleles and maps to 189 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161610.2	tcf3b-201	6424	652aa	ENSDARP00000135697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1H1L4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000165667.2	tcf3b-202	6373	635aa	ENSDARP00000135672.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMI6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 19, Transcript length: 6,424 bps, Translation length: 652 residues

Version

ENSDART00000161610.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.