Transcript: ENSDART00000155857.3 nid2a-202

Description

nidogen 2a (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-030827-2]

Gene Synonyms

chunp382, fb77a09, fc18d04, im:7144424, nid2, wu:fb77a09, wu:fc18d04

Location

Chromosome 17: 14,796,926-14,876,758 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 112 domains and features, is associated with 2150 variant alleles and maps to 181 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000075707.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155857.3	nid2a-202	5230	1576aa	ENSDARP00000128493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WE42	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156476.3	nid2a-206	838	279aa	ENSDARP00000129293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WGD8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000155907.2	nid2a-203	814	272aa	ENSDARP00000127516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBC5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000154473.3	nid2a-201	773	258aa	ENSDARP00000129416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WGQ8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000157051.2	nid2a-207	728	243aa	ENSDARP00000128397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDU8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000156287.3	nid2a-204	649	216aa	ENSDARP00000129110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WFV5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000156326.3	nid2a-205	423	141aa	ENSDARP00000127795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WC52	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 5,230 bps, Translation length: 1,576 residues

Version

ENSDART00000155857.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000155857.3 nid2a-202

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Transcript: ENSDART00000155857.3 nid2a-202

Summary

About Us

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