Transcript: ENSDART00000153401.2 tap2t-202

Description

transporter associated with antigen processing, subunit type t, teleost specific [Source:ZFIN;Acc:ZDB-GENE-130531-48]

Gene Synonyms

abcb3, si:dkey-57h18.2, tap2-like, zmp:0000000580

Location

About this transcript

This transcript has 12 exons, is annotated with 24 domains and features, is associated with 326 variant alleles and maps to 210 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153401.2	tap2t-202	2846	728aa	ENSDARP00000127120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2I0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000039510.6	tap2t-201	2187	728aa	ENSDARP00000039509.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2I0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,846 bps, Translation length: 728 residues

Version

ENSDART00000153401.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.