Transcript: ENSDART00000151739.3 pax10-202

Description

paired box 10 [Source:ZFIN;Acc:ZDB-GENE-081022-10]

Gene Synonyms

pax10a, pax6.2, pax6l, zgc:193504, zgc:193533

Location

About this transcript

This transcript has 9 exons, is annotated with 17 domains and features, is associated with 529 variant alleles and maps to 119 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151608.2	pax10-201	941	275aa	ENSDARP00000126153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IT91	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165638.3	pax10-203	1617	275aa	ENSDARP00000140457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IT91	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151739.3	pax10-202	1043	236aa	ENSDARP00000126201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ITD8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 6, Transcript length: 1,043 bps, Translation length: 236 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151739.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.