Transcript: ENSDART00000147344.2 lhx8b-201

Description

LIM homeobox 8b [Source:ZFIN;Acc:ZDB-GENE-081105-153]

Gene Synonyms

si:dkey-267j14.2

Location

About this transcript

This transcript has 6 exons, is annotated with 21 domains and features, is associated with 228 variant alleles and maps to 103 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147344.2	lhx8b-201	714	238aa	ENSDARP00000121291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R622	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000187864.1	lhx8b-202	561	186aa	ENSDARP00000155506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QQY9	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 714 bps, Translation length: 238 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000147344.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.