Transcript: ENSDART00000146370.3 slc7a1a-202

Description

solute carrier family 7 member 1a [Source:ZFIN;Acc:ZDB-GENE-091116-69]

Gene Synonyms

si:ch211-69k21.2, slc7a1

Location

Chromosome 10: 24,445,698-24,493,323 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 26 domains and features, is associated with 1375 variant alleles and maps to 174 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000016439.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146370.3	slc7a1a-202	2223	652aa	ENSDARP00000121637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QF99	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000183510.1	slc7a1a-203	1956	651aa	ENSDARP00000152628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QFJ7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000008248.9	slc7a1a-201	1953	650aa	ENSDARP00000027285.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0D2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,223 bps, Translation length: 652 residues

Version

ENSDART00000146370.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000146370.3 slc7a1a-202

Summary

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Transcript: ENSDART00000146370.3 slc7a1a-202

Summary

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