Transcript: ENSDART00000145775.2 mpp4a-202

Description

membrane protein, palmitoylated 4a (MAGUK p55 subfamily member 4) [Source:ZFIN;Acc:ZDB-GENE-070912-523]

Gene Synonyms

mpp4, si:dkey-33m14.4

Location

About this transcript

This transcript has 11 exons, is annotated with 18 domains and features, is associated with 142 variant alleles and maps to 42 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000175639.2	mpp4a-203	2301	627aa	ENSDARP00000143320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9N6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145775.2	mpp4a-202	921	307aa	ENSDARP00000116898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBL2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000141194.2	mpp4a-201	782	260aa	ENSDARP00000114267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QF35	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 921 bps, Translation length: 307 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000145775.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.