Transcript: ENSDART00000144744.2 col5a2a-201

Description

collagen, type V, alpha 2a [Source:ZFIN;Acc:ZDB-GENE-030616-13]

Gene Synonyms

col5a2l, im:7038599, si:by143e18.1, si:ch211-198b21.5, si:dz167c3.3, wu:fa13f03, wu:fa98d01, wu:fj05e03

Location

About this transcript

This transcript has 54 exons, is annotated with 47 domains and features, is associated with 684 variant alleles and maps to 373 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144744.2	col5a2a-201	5063	1521aa	ENSDARP00000122378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QT86	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 54, Coding exons: 54, Transcript length: 5,063 bps, Translation length: 1,521 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000144744.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.