Transcript: ENSDART00000144013.2 loxl2b-202

Description

lysyl oxidase-like 2b [Source:NCBI gene;Acc:791144]

Gene Synonyms

im:7136137, si:dkeyp-32b1.1, wu:fk12g04, zgc:158414

Location

Chromosome 5: 27,440,335-27,487,789 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 42 domains and features, is associated with 1633 variant alleles and maps to 357 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044074.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184129.1	loxl2b-203	6171	762aa	ENSDARP00000146651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1V4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185815.1	loxl2b-204	4884	762aa	ENSDARP00000157626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1V4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000064701.6	loxl2b-201	4613	762aa	ENSDARP00000064700.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1V4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144013.2	loxl2b-202	3555	762aa	ENSDARP00000118755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1V4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 3,555 bps, Translation length: 762 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A1L1V4

Version

ENSDART00000144013.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144013.2 loxl2b-202

Summary

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Transcript: ENSDART00000144013.2 loxl2b-202

Summary

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