Transcript: ENSDART00000143679.2 si:dkey-78l4.12-201

Description

si:dkey-78l4.12 [Source:ZFIN;Acc:ZDB-GENE-060503-364]

Location

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features, is associated with 162 variant alleles and maps to 193 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144453.2	si:dkey-78l4.12-202	515	144aa	ENSDARP00000113689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000143679.2	si:dkey-78l4.12-201	642	214aa	ENSDARP00000116376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R267	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 642 bps, Translation length: 214 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000143679.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.