Transcript: ENSDART00000140208.3 lactbl1a-202

Description

lactamase, beta-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7625]

Gene Synonyms

fk56c03, si:dkey-68l7.3, wu:fk56c03

Location

Chromosome 23: 21,964,325-21,973,835 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 185 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000089063.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135690.2	lactbl1a-201	2040	563aa	ENSDARP00000117327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000189378.1	lactbl1a-203	1527	508aa	ENSDARP00000150388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QLF3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000140208.3	lactbl1a-202	1007	267aa	ENSDARP00000116478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBH1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,007 bps, Translation length: 267 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000140208.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000140208.3 lactbl1a-202

Summary

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Transcript: ENSDART00000140208.3 lactbl1a-202

Summary

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