Transcript: ENSDART00000138000.3 si:dkey-250k15.7-201

Description

si:dkey-250k15.7 [Source:ZFIN;Acc:ZDB-GENE-100921-33]

Location

About this transcript

This transcript has 9 exons, is annotated with 25 domains and features, is associated with 330 variant alleles and maps to 37 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138000.3	si:dkey-250k15.7-201	1838	407aa	ENSDARP00000116462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156132.3	si:dkey-250k15.7-204	1176	391aa	ENSDARP00000128652.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEK1	-
ENSDART00000141082.2	si:dkey-250k15.7-202	742	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148313.2	si:dkey-250k15.7-203	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,838 bps, Translation length: 407 residues

Version

ENSDART00000138000.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.