Transcript: ENSDART00000136943.2 si:dkey-21e2.13-201

Description

si:dkey-21e2.13 [Source:ZFIN;Acc:ZDB-GENE-050208-379]

Location

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 175 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136943.2	si:dkey-21e2.13-201	866	258aa	ENSDARP00000114492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000190075.1	si:dkey-21e2.13-203	1748	137aa	ENSDARP00000145095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PW58	-
ENSDART00000141097.3	si:dkey-21e2.13-202	717	239aa	ENSDARP00000116476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1U9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 866 bps, Translation length: 258 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000136943.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.