Transcript: ENSDART00000135436.3 jtb-204

Description

jumping translocation breakpoint [Source:ZFIN;Acc:ZDB-GENE-060503-674]

Gene Synonyms

si:ch211-191i18.1

Location

Chromosome 19: 42,227,400-42,236,185 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 306 variant alleles and maps to 250 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070150.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131574.3	jtb-203	2316	158aa	ENSDARP00000123066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L897	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000135436.3	jtb-204	2393	157aa	ENSDARP00000114439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L896	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000102698.5	jtb-201	1875	103aa	ENSDARP00000093473.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L895	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000102702.4	jtb-202	477	158aa	ENSDARP00000093477.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L897	-
ENSDART00000151410.2	jtb-205	688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,393 bps, Translation length: 157 residues

Version

ENSDART00000135436.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135436.3 jtb-204

Summary

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Transcript: ENSDART00000135436.3 jtb-204

Summary

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