Transcript: ENSDART00000134649.4 cnga1a-202

Description

cyclic nucleotide gated channel subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090312-66]

Gene Synonyms

si:dkey-22i16.2

Location

About this transcript

This transcript has 7 exons, is annotated with 28 domains and features, is associated with 245 variant alleles and maps to 138 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134649.4	cnga1a-202	2594	697aa	ENSDARP00000115254.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JHY6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000048225.8	cnga1a-201	2094	697aa	ENSDARP00000048224.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JHY6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,594 bps, Translation length: 697 residues

Version

ENSDART00000134649.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.