Transcript: ENSDART00000131978.2 ptx3b-201

Description

pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]

Gene Synonyms

si:dkey-23h1.5

Location

About this transcript

This transcript has 2 exons, is annotated with 16 domains and features, is associated with 73 variant alleles and maps to 67 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131978.2	ptx3b-201	1163	387aa	ENSDARP00000121080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7P9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,163 bps, Translation length: 387 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000131978.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.