Transcript: ENSDART00000127173.4 clu-201

Description

clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]

Gene Synonyms

zgc:73352

Location

Chromosome 20: 39,260,608-39,273,987 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 418 variant alleles and maps to 298 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000010434.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127173.4	clu-201	1772	449aa	ENSDARP00000110504.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SPR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000192708.1	clu-204	1661	448aa	ENSDARP00000151700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RS75	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000141193.3	clu-202	770	121aa	ENSDARP00000115308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q875	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000153114.2	clu-203	731	214aa	ENSDARP00000127463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JB41	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,772 bps, Translation length: 449 residues

Version

ENSDART00000127173.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000127173.4 clu-201

Summary

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Transcript: ENSDART00000127173.4 clu-201

Summary

About Us

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