Transcript: ENSDART00000125174.4 nr1i2-202

Description

nuclear receptor subfamily 1, group I, member 2 [Source:ZFIN;Acc:ZDB-GENE-030903-3]

Gene Synonyms

PXR

Location

About this transcript

This transcript has 9 exons, is annotated with 29 domains and features, is associated with 2098 variant alleles and maps to 193 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125174.4	nr1i2-202	2502	430aa	ENSDARP00000106185.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1H8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000061525.5	nr1i2-201	2433	430aa	ENSDARP00000061524.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1H8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,502 bps, Translation length: 430 residues

Version

ENSDART00000125174.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.